"Diplom" Curriculum

The marine biology study period comprises 49 so-called "weekly hours" per term and ends with the diploma degree ("Diplom"). The lessons are organised in close co-operation with the Institute of Baltic Research in Warnemünde, and their topics comply with ongoing major research activities in marine biology in order to ensure a modern formation oriented at the current requirements. Training courses in field stations and onboard research ships, excursions, laboratory and field experiments and student research projects provide good practical abilities during the studies. In addition, existing exchange programs facilitate an international student mobility.

theory knowledge

methodological abilities

Structural analysis

Structural analysis

Physiological aspects

Physiological aspects

Primary production

Primary production

Secondary production

Secondary production

Transport processes

Transport processes

Ecological theory

Ecological theory

Regional marine biology

Regional marine biology

Applied marine biology

Applied marine biology

 


 

Curriculum for Marine Biology students at the University of Rostock

Introduction

The formation in marine biologyis predominantly oriented towards ecology topics. It takes place in the main study period, and is based on an introductory study period which includes zoology and botany lessons. However, the complexity of the marine environment requires additional knowledge in microbiology, physical oceanography, marine chemistry, geochemistry and sedimentology. The following curriculum describes in detail the exigencies a marine biologist has to fulfill. In general, a "Diplom" degree will however not suffice for a durable job at a marine biological institute. Instead, it forms the background needed for post-graduate qualification studies like e.g. a PhD work, which usually is a project-related part-time position or a scholarship. The "Diplom" formation thus enables to address simple ecological problems in a self-dependent approach, particularly in applied research and in jobs other than at research institutes that need to comply with international standards, like e.g. evironmental monitoring and coastal zone management.
The choice of subsidiary academics has a decisive influence on the subsequent qualilfication for a specific field of work. Among the non-biological subsidiaries, physical oceanography and marine chemistry are highly recommended. Environment protection laws also are a valuable option. For the biological subsidiaries, the emphasis can be placed on different spatial and structural scales, with either botanics, zoology, microbiology, or genetics, cell biology or molecular biology.

Aims of the formation

The main goal of this formation is to enable students to carry out scientific work in a self-dependent way. A marine biologist must be able to understand complex systems and to rapidly get acquainted with new fields of activities. Being a good team player and willing to work on an interdisciplinary level also are important prerequisites. Hence, this curriculum includes many topics that are closely linked to neighbouring disciplines.
The level of fact knowledge that is required to comply with these conditions is, of course, debatable. Practical proficiency also is a crucial element, but lacking background knowledge may severely impede interdisciplinary work. The range of topics listed here show how versatile a marine biologist has to be nowadays - and it will be difficult to attain deeper expertise in all of them. Many of them are essential, some are rather peripheral skills that can be extended during post-graduate studies. However, this discrimination was omitted here as it strongly depends on individual preferences.
At the beginning of a scientific education, the impression may emerge that it is important to accumulate a high amount of textbook knowlede. The formation will however show that a scientific progress can only be achieved with some creativity and the ability to develop and to pursue new ideas. Todays students need to produce results that are still unknown to their present generation of instructors. Working in science is an enjoyable occupation which requires enthusiastic researchers.

The following curriculum for marine biology as main academics is subdivided into a part with theoretical knowledge and a list of practical skills

 

 


Theory knowledge

A postgraduate marine biologist should be able to express the following theoretical considerations, adapt them to concise situations and possess the technical knowledge listed below:

 

Structural analysis

 

Abiotic factors

 

Licht intensity, temperature, salinity, nutrients and oxygen concentrations in different marine habitats, turbulence levels, Reynolds numbers, grain sizes and chemical composition of sediments, porosity, redox-conditions and trace elements

 

 

Organisms

 

Morphology of predominant marine organisms, systematics of heterotrophic and autotrophic organisms, autecology of common Baltic and North Sea species, geographical distribution, taxonomical skills

 

 

Biomass

 

Gravimetrical, volumetrical and biochemical methods of biomass determination, conversion factors, standing stocks for different marine habitats, size spectra

 

 

Diversity

 

Knowledge of different diversity indices, e.g. Shannon-Weaver, Sanders, Hurlbert; equity and common range of these values

 

 

Habitats and communities

 

Pelagial, benthal, phytal, main characteristics of typical habitats, synecology, cluster analysis, dendrograms, Bray-Curtis index, MDS-plots

 

 

Physiological aspects of marine life

 

Osmoregulation

 

homoio- and poikilo-osmotic fauna, Na+ transport, ion concentration regulation

 

 

Temperature

 

Q10 rule, Arrhenius equation, psychro-, meso-, and thermophilic abilities, freezing resistance

 

 

Oxygen

 

Catabolism, function of respiratory chains, RQ, adaptations to oxygen deficciency, oxy-conformism, oxy-regulation, lethal levels of different taxa, anaerobiosis

 

 

Sulphide

 

Origin and concentration levels, detoxification mechanisms, SOD reaction, symbiosis

 

 

Pressure

 

Effects of pressure on a molecular scale, dissolved gasses, barophilic organisms

 

 

Primary production (pelagic and benthic)

 

Photosynthesisys

 

Biochemical background, light, nutrient supply and uptake kinetics, P/I curves

 

 

Primary production in the oceans

 

Concept of critical depth, extent of the surface layer in different habitats, new and regenerated production, PQ, nutrient sources and limitations, f-ratio, export production, annual cycles

 

 

Secondary production

 

Population dynamics

 

Determination of cohorts, reproductive cycles, larval dispersal strategies, Boysen-Jensen equation, production and elimination

 

 

Growth kinetics

 

Michaelis-Menten kinetics, Bertalanffy equation, growth limitation (Liebig, Monod)

 

 

Microbial loop

 

DOC, electro-enzymes, bacteria, ciliates and flagellates, virusses

 

 

Energy fluxes and ecological efficiency

 

Energy flux equation of Crisp, ecological efficiency of different feeding strategies (A/C, C/P), RQ values

 

 

Transport processes

 

1st and 2nd Fick law, transport equations

 

 

Sedimentation and resuspension

 

Stoke's law, Gibbs equation, seasonal sedimentation patterns, Hjulström plot, bed roughness, critical shear stress, aggregate formation types, aggregate formationand disaggregation on density discontinuities, micro-niches, exopolymers EPS

 

 

Hydrodynamics at interfaces

 

von Karman-Prandtl equation, Kolmogoroff length scales, dissipation energy, diffusive sublayer, viscous sublayer, logarithmic layer

 

 

Bioturbation

 

Animal-sediment interactions, mixing coefficients for particles and solutes, Kbio, Db, natural and artificial tracers

 

 

Vertical migraton

 

Zooplankton strategies, seasonal and diurnal rhythms

 

 

Lateral advection

 

Conveyor belt, regional flow patterns, deep water formation, benthic nepheloid layers, sinks, residence times, fluvial input, upwelling, current riding, cross-shelf transport

 

 

Ecological theory

 

Intra and Interspecies interactions

 

Competition

 

  • k- and r- strategy, dispersion strategies, Lotka-Volterra model, ZNGI-line

 

Predator-prey ratio

 

  • Keystone predator, grazing, clearance rate, defence strategies

 

Epibiosis, symbiosis, parasitism

 

  • Substratum selection, defence strategies, parasite-host interactions, microbial symbiosis, corals, seep organisms

 

 

Material cycles

 

Carbon cycle

 

  • Atmosphere-ocean exchange, global and regional carbon budget, carbonate system, remineralisation, carbon turnover in oxic and anoxic systems, methane production and oxidation

 

Nitrogen cycle

 

  • Nitrogen fixation, degradation of N components, nitrification-denitrification, nitrogen respiration

 

Sulphur cycle

 

  • Assimilating and dissimilating suplphate oxidation, sulphate respiration, sulfide oxidation, phototrophic sulphur bacteria, symbiotic sulphur bacteria

 

Turnover of phosphate, iron and other trace metals

 

  • Iron fixation with phosphate, limiting trace elements, Redox potential of metals

 

Benthic-pelagic coupling

 

  • Hargrave and Suess model, effects of plankton bloom sedimentation, coupling patterns in different systems, Odum models

 

 

Size-spectrum theory

 

Size efficiency hypothesis, Schwinghammer plot, size class - activity relations

 

 

Ecosystem theory

 

Animal-sediment interaction, mixing coefficients for particle and solute transport, Kbio, Db, natural and artificial tracers

 

 

Vertical migration

 

Stability criteria

 

  • permanence, resistance, resilience

 

Energy flux concept

 

  • Lindemann trophic model, Odum models, thermodynamical basis for energy and matter flux models

 

 

Regional marine biology

 

Baltic

 

 

North Sea and Wadden Sea

 

 

Coastal systems

 

Sandy beaches and rocky shores

 

Lagoons and coves

 

River estuaries

 

Mangroves

 

Coral reefs

 

 

Polar oceans

 

 

Open ocean and shelf sea

 

Upwelling zones

 

 

Deep sea

 

Hot vents

 

Cold seeps

 

 

Applied marine biology

 

Ressource exploitation

 

Aquaculture, fisheries, crude materials

 

 

Eutrophication

 

River discharge mechanisms and magnitude of anthropogenic input

 

 

Pollution

 

Organic and anorganic pollutants and their effect on the oceans, toxicity and resistance, threshold levels, offshore dumping

 

 

Fouling

 

Problems linked to the use of anti-fouling paint, introduction of new species

 

 


 

Methodological abilities

A marine biologist should be able to use the following methods:

 

Structural analysis

 

Analytics

 

Dissection techniques, dying methods, nitrate, nitrite, ammonium, phosphate, silicate, and oxygen detection in water samples, Redox, porosity measurements, grain size analysis, AFDW (ash-free dry weight), Corg and Norg analysis, ATP

 

 

Operating instruments

 

Handling of optical devices such as microscopes, binocular microscopes, cameras, plankton nets, bottom grabs, use of instruments at sea

 

 

Mathematics

 

Calculations using the exponential function, PC skills, cluster analysis, statistics

 

 

Physiological aspects of marine life

 

Analytics

 

Freezing resistance, ETS method, Winkler oxygen quantification, sulphide analysis, simple enzymatic tests

 

 

Operating instruments

 

Respiratory chambers, culture and livestock keeping methods (temperature control units)

 

 

Mathematics

 

Calculations using the exponential function, PC skills, cluster analysis, statistics

 

 

Primary production (pelagic and benthic)

 

Analytics

 

C14 method, interpretation of 15N data, and methods from "structural analysis"

 

 

Operating instruments

 

Microalgae cultivation, scintillation counter, microelectrodes, light intensity

 

 

Mathematics

 

Calculations using the exponential function, PC skills, cluster analysis, statistics

 

 

Secondary production

 

Analytics

 

Enzyme tests, respiration measurements, directe calorimetry, bomb calorimetry, urea analysis

 

 

Operating instruments

 

Epifluorescence, interference and phase contrast microscopes, dying techniques, picture analysis, and methods from "primary production"

 

 

Mathematics

 

Distribution statistics, spreadsheet operations, time-series interpretation, and methodes from "structural analysis"

 

 

Transport processes

 

Analytics

 

Interpretation of 210Pb and 234Th profiles, Br- method

 

 

Operating instruments

 

Particle trap technique, particle camera, flume channel, flow sensors, digital image analysis, operation of multinets, underwater-photography

 

 

Mathematics

 

Using analytical solutions to simple differential equations, simple modelling of mixing coefficients

 

 

Ecological theory, regional and applied marine biology

The items "ecological theory", "regional marine biology" and "applied marine biology" require no additional methods that could be carried out by a marine biologist on his own. More demanding methods, e.g. HPLC (high pressurel liquid chromatography) or AAS (atom absorbtion spectrometry), can only be demonstrated during the studies. The analytical capabilities have to be refined in post-graduation studies (PhD) or in interdisciplinary collaboration with e.g. marine chemists.

 

Detailed information about studying in Rostock can be found at the student affairs office of the Biosciences institute:
http://www.biologie.uni-rostock.de/studium/index.html